BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034H08SP1|AL429970
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1094 1748 0.0
>3x_Contig1094
Length = 4859
Score = 1748 bits (878), Expect = 0.0
Identities = 893/900 (99%), Gaps = 1/900 (0%)
Strand = Plus / Minus
Query: 1 atcataattgtacttttcga-gccagcatcaatgctgcccagattcagagcgtgatattg 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3493 atcataattgtacttttcgaagccagcatcaatgctgcccagattcagagcgtgatattg 3434
Query: 60 actagactatactatgctggtagaatgatgaatcgatcttttttggrctgccactacata 119
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3433 actagactatactatgctggtagaatgatgaatcgatcttttttggactgccactacata 3374
Query: 120 ttcaactcaagtgtagtcctcatattagcagccttcatacagtcgcttcccaattacctg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3373 ttcaactcaagtgtagtcctcatattagcagccttcatacagtcgcttcccaattacctg 3314
Query: 180 cttaatgaaagcagtgatgttaatattttgttcagccgggttcaagataatcttgacgtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3313 cttaatgaaagcagtgatgttaatattttgttcagccgggttcaagataatcttgacgtt 3254
Query: 240 ttacaacgtatttctcagtacaatgtggcaggattcaatttcaataagcaactaactgaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3253 ttacaacgtatttctcagtacaatgtggcaggattcaatttcaataagcaactaactgaa 3194
Query: 300 ctaatagaacttattagctgcgaacaagttcagaaaatgtacaacggtaatatgcaaaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3193 ctaatagaacttattagctgcgaacaagttcagaaaatgtacaacggtaatatgcaaaga 3134
Query: 360 cattctctcaacgcgactagcgcaatagaracttttacaattgctttaaagtcaccatct 419
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3133 cattctctcaacgcgactagcgcaatagaaacttttacaattgctttaaagtcaccatct 3074
Query: 420 gttgaggaaaagaacaattcatatgagggccaggagctattaagccatatggatttatca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3073 gttgaggaaaagaacaattcatatgagggccaggagctattaagccatatggatttatca 3014
Query: 480 gaagttctagaattgatgacatcaagcaacggctatccaaactctggaacttctcacttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3013 gaagttctagaattgatgacatcaagcaacggctatccaaactctggaacttctcacttt 2954
Query: 540 gatgaggatgatttcctcaagttttcaaacttcatgctgtgaatacttttatvagatttt 599
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2953 gatgaggatgatttcctcaagttttcaaacttcatgctgtgaatacttttataagatttt 2894
Query: 600 tattacaatatgactttcattagctacagactgtattgatatatttvvsacgaaagatag 659
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2893 tattacaatatgactttcattagctacagactgtattgatatatttaaaacgaaagatag 2834
Query: 660 gaaggtataacattaagtttgagttggattcaaagccaagaatgatttaagaggtataat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2833 gaaggtataacattaagtttgagttggattcaaagccaagaatgatttaagaggtataat 2774
Query: 720 tattgtttaaatatcgttatatatactgcaccatcgggtaagaaagaagtgtttgatact 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2773 tattgtttaaatatcgttatatatactgcaccatcgggtaagaaagaagtgtttgatact 2714
Query: 780 attcaggtatgcaaaagttatgctcttccacagccaccacctcctggtgtcataattatg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2713 attcaggtatgcaaaagttatgctcttccacagccaccacctcctggtgtcataattatg 2654
Query: 840 acacgatcaccaggtctgataggaacagtattttttccacccatgttgaccttcgaattg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2653 acacgatcaccaggtctgataggaacagtattttttccacccatgttgaccttcgaattg 2594
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6587
Number of Sequences: 1807
Number of extensions: 6587
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)